bayes.model.aver | Bayesian Model Averaging |
bayes.model.aver.explicit | Bayesian Model Averaging |
generative.prob | Compute generative probabilities from BLAST output |
generative.prob.nucl | Compute generative probabilities from BLAST output |
parallel.temper | Parallel Tempering MCMC |
parallel.temper.explicit | Parallel Tempering MCMC |
parallel.temper.nucl | Parallel Tempering MCMC |
parallel.temper.nucl.explicit | Parallel Tempering MCMC |
reduce.space | Reduce the space of potential species by fitting the mixture model with all potential species as categories |
reduce.space.explicit | Reduce the space of potential species by fitting the mixture model with all potential species as categories |
step1 | Example output of generative.prob() for use in the vignette/examples |
step2 | Example output of reduce.space() for use in the vignette/examples |
step3 | Example output of parallel.temper() for use in the vignette/examples |