Package pal.substmodel
Class RateMatrixUtils
java.lang.Object
pal.substmodel.RateMatrixUtils
- Version:
- $Id: RateMatrixUtils.java,v 1.2 2001/07/13 14:39:13 korbinian Exp $
- Author:
- Korbinian Strimmer, Alexei Drummond, Matthew Goode
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic final RateMatrix[]
getCopy
(RateMatrix[] toCopy) static RateMatrix
getInstance
(int typeID, int modelID, double[] params, double[] freq) Create rate matrix given model and data type codes
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Constructor Details
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RateMatrixUtils
public RateMatrixUtils()
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Method Details
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getInstance
Create rate matrix given model and data type codes- Parameters:
typeID
- code for data typemodelID
- code for model of substitutionparams
- model parametersfreq
- model frequencies- Returns:
- rate matrix
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getCopy
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