Uses of Class
pal.misc.LabelMapping
Packages that use LabelMapping
Package
Description
Classes dealing with sequence alignments, including methods for reading
and printing in several possible formats, as well as rearranging and
concatenating.
GUI components for some special objects (e.g., trees).
Classes that don't fit elsewhere ;^)
Classes for providing the data structure of
trees, for constructing and modifying trees, and for parameterizing
trees (e.g., clock constraint).
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Uses of LabelMapping in pal.alignment
Constructors in pal.alignment with parameters of type LabelMapping -
Uses of LabelMapping in pal.gui
Methods in pal.gui with parameters of type LabelMappingModifier and TypeMethodDescriptionfinal void
TreeComponent.setLabelMapping
(LabelMapping lm) final void
TreePainter.setLabelMapping
(LabelMapping lp) -
Uses of LabelMapping in pal.misc
Methods in pal.misc that return LabelMappingModifier and TypeMethodDescriptionLabelMapping.getRelabeled
(LabelMapping.Relabeller relabeller) LabelMapping.getUniquifiedMappings()
If a mapping occurs more than once will rename instance to "x 1", "x 2"... -
Uses of LabelMapping in pal.tree
Methods in pal.tree with parameters of type LabelMappingModifier and TypeMethodDescriptionprotected void
SimpleNode.init
(Node n, boolean keepId, LabelMapping lm) Initialized node instance variables based on given Node.Constructors in pal.tree with parameters of type LabelMappingModifierConstructorDescriptionSimpleNode
(Node n, LabelMapping lm) SimpleTree
(Tree tree, LabelMapping lm) clone constructor